Team:SJTU-BioX-Shanghai/daynotes

From 2014.igem.org

(Difference between revisions)
Line 94: Line 94:
             <div class="content">
             <div class="content">
                 <article class="post__article">
                 <article class="post__article">
-
                     <h2  id="July">July Week1  Plasmid amplification for further construction</h2><br>
+
                     <h2  id="July">July Week 1: Plasmid Amplification</h2><br>
-
                     <p>Plasmid amplification for further construction; <br>
+
                     <p>We chose pRSFDuet-1, pACYCDuet-1 and pCDFDuet-1 as expression vectors and pBluescript II KS(+) as the connector. These plasmids were amplified for further construction.<p>
-
                        We chose pRSFDuet-1, pACYCDuet-1 and pCDFDuet-1 as expression vectors and pBluescript II KS(+) as the connector.<p>
+
                     <h2 id ="JulyWeek2" >July Week2</h2><br>
                     <h2 id ="JulyWeek2" >July Week2</h2><br>
                     <p>Construct the gene of our fusion protein: ssDsbA-FP-HL-Lgt-FL-TAL using splicing by overlap extension.   
                     <p>Construct the gene of our fusion protein: ssDsbA-FP-HL-Lgt-FL-TAL using splicing by overlap extension.   

Revision as of 18:32, 16 October 2014

Week Notes
Protocol

July Week 1: Plasmid Amplification


We chose pRSFDuet-1, pACYCDuet-1 and pCDFDuet-1 as expression vectors and pBluescript II KS(+) as the connector. These plasmids were amplified for further construction.

July Week2


Construct the gene of our fusion protein: ssDsbA-FP-HL-Lgt-FL-TAL using splicing by overlap extension. We connected ssDsbA-FP-HL-lgt for one part of this fusion protein and FL-TAL for another. Then connect them together.

July Week3


Connected ssDsbA-FP-HL-lgt by splicing by overlap extension. Transform, colony picking plasmid extraction and digestion identification; Sequencing results showed accurate construction.

July Week4


Use golden gate to connected TAL of 2012 Freiburg igem. Transform, colony picking plasmid extraction and digestion identification.

August Week1-2


Test the conditions for the PCR. Connected TAL, transform, colony picking plasmid extraction and digestion identification. Find with our electrophoresis band. Expression vectors and connector plasmid are confirmed by sequencing.

August Week3


There are some problems about Freiburg’s parts. We can’t connected TAL in the right order. So we design some new primes for PCR that can produce the right sequence.

August Week4


Design a few new ports for the fusion protein. Sequencing results showed accurate construction. Observe the FP using LSCM to confirm the fusion protein can locate on the membrane.

September Week1


Try co-transformation: Prsf pacyc pBluescript . Find the conditions of protein expression. Find the way to construct the TAL.

September Week2


Find the enzymes for the application. Find the way to detect the substrate in these pathways. Connector plasmid modification.

September Week3


TAL gene synthesis. Construct the part with our new ports.

September Week4


TAL gene synthesis.