Team:SDU-Denmark/Tour30

From 2014.igem.org

(Difference between revisions)
Line 17: Line 17:
<li><b>Plasmid constructions:</b> Martin, Camilla, Anne, Ulrika, Signe, Victoria, Jens Jakob, Daniel and Sarah (the whole team)</li>
<li><b>Plasmid constructions:</b> Martin, Camilla, Anne, Ulrika, Signe, Victoria, Jens Jakob, Daniel and Sarah (the whole team)</li>
<li><b>USER cloning:</b> Daniel</li>
<li><b>USER cloning:</b> Daniel</li>
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<li><b>Flow-cytometry:</b> Signe</li>
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<li><b>Flow cytometry (FACS):</b> Signe</li>
<li><b>Growth experiments:</b> Martin, Victoria and Signe</li>
<li><b>Growth experiments:</b> Martin, Victoria and Signe</li>
<li><b>Worm experiment:</b> Martin and Jens Jakob</li>
<li><b>Worm experiment:</b> Martin and Jens Jakob</li>

Revision as of 20:23, 17 October 2014

Process

From idea to bricks

On the 20th of March, the team was assembled, and we had our first meeting on the 25th, where some of us met each other for the first time. A lot of expectations had to be matched, and we spent the next few weeks getting to know each other through team building.

In the beginning, the biggest process was to come up with an idea. Several brainstorming methods were used, but the list of ideas suddenly became endless, and an abatement process had begun! At our first introduction to the wet lab work, at the BioBrick workshop at DTU on the 2nd to 4th of May, we had cut the list down to just four ideas, which was discussed with the other two Danish iGEM teams attending the workshop; from the University of Copenhagen and the Technical University of Denmark, respectively. A few days after the workshop, we finally decided on the project: Edible coli!

The next few weeks, we spent researching about how to design our system and the possibilities of our idea. The idea slowly evolved, and we decided on which bricks to use from the iGEM Registry of Standard Biological Parts and which bricks to make ourselves.

Mid July, we finally began working in the wet lab, starting out with crash course, organized by our instructors. Since then, we have been working day and night, both in- and outside the laboratory. We have all learned a lot during the summer, and had some diversity by all being, more or less, part of both the wet and dry lab process. Throughout the project, we have all helped each other, but the main responsibilities have been divided as follows:

Wet lab

  • Plasmid constructions: Martin, Camilla, Anne, Ulrika, Signe, Victoria, Jens Jakob, Daniel and Sarah (the whole team)
  • USER cloning: Daniel
  • Flow cytometry (FACS): Signe
  • Growth experiments: Martin, Victoria and Signe
  • Worm experiment: Martin and Jens Jakob
  • Western blots: Victoria
  • Dry lab

  • Modelling: Sarah and Jens Jakob
  • Primer design: Daniel and Ulrika
  • Protein design: Camilla
  • Sequence analysis: Jens Jakob and Daniel
  • Policy and practices: Anne, Signe and Victoria
  • Video adventure: Daniel and Ulrika
  • Wiki design: Sarah
  • Wiki text: Martin, Camilla, Anne, Ulrika, Signe, Victoria, Jens Jakob, Daniel and Sarah (the whole team)


  • Courses and workshops

    Biobrick workshop at DTU (2nd of May - 4th of May)

    Biobrick workshop at DTU.

    Our team was lucky to participate in the BioBrick workshop at DTU in Copenhagen, which took place over a full weekend in the spring. The program for the weekend included Safety, USER cloning, general information on iGEM, wiki design and editing, and social events. Our team had not been in the wet-lab at that time, some had not even had a pipette in hands before, so this weekend was a really good introduction to the laboratory, with a good mix of theory and practice. We learned a lot and had very much fun - many thanks to the DTU-Denmark team for teaching us how to make USER cloning and for hosting a great workshop.



    Interactive lecture: How to find information (26th of May)

    We had a visit from people from the library who taught us how to optimize the search of information in different sources, such as Web of Science, Compendex, Encyclopedia of Molecular Cell Biology and Molecular Medicine, Ullmann, etc. We want to thank them a lot for their time and great help!



    The enneagram: Discover your type (5th of June)

    Enneagram.

    We had a complete day course on “The enneagram”, which is a tool to identify types of personalities. We did this to strengthen the personal bonds between the group, to become aware of our own up-and downsides and to gain awareness of how to use this knowledge in favor of our team and project. Thank you very much to Jane, from the company “Trivselsforum” for her uninterested help!



    Ethics workshop at KU (21st of August)

    Ethics workshop at KU.

    Three girls from our team participated in the Ethics Workshop in Copenhagen organized by the UNIK-Denmark team. Our project encourages many ethical issues and the workshop was therefore very suitable and beneficial. We learned a lot about dealing with ethical issues in synthetic biology and got many good inputs to an ethics-related discussion about our project. In addition to this we also got in touch with relevant people and organizations that have been able to help us continue with our human practices. We would like to thank the UNIK-Denmark team for the invitation and their work - it has been a very nice workshop.