Team:Penn State/Notebook

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Penn State iGEM 2014 Notebook Page

Here you will find weekly summaries of our wet laboratory progress, team updates, and accomplishments outside the laboratory. Below is our detailed, day-to-day Laboratory Notebook.

Weekly Summaries

Week 1
Tuesday, May 20 - Sunday, May 25

- Notebook Entries

iGEM 2014 had their first meeting with Dr. Salis and Dr. Richard. Ashlee, Emily, Clay, and Sam met each other. Emily will help Ashlee continue work on her Honors Thesis with the project "Engineering a Biodetoxification Pathway for Lignocellulosic Feedstock". Ashlee began to show Emily around the lab and instruct her during her first cloning experiences while they continued Ashlee's semester research trying to add a terminator upstream of the HMF pathway where dCas9 would be inserted. The dCas9 system has a transacting RNA sequence which could disrupt upstream genes if it was not turned off correctly.

Clay and Sam began work for Clay's Honors Thesis in Biological Engineering on the "Codon Optimization" project the .....

Week 2
Monday, May 26 - Sunday, June 1

- Notebook Entries

Ashlee and Emily saw no success with adding the terminator and must move on to a new approach. With the advice of Dr. Salis and graduate student Iman Farasat, they decided to insert the HMF pathway and the dCas9 system into the genome using homologous recombination and the Lambda Red Recombinase system.

Week 3
Monday, June 2 - Sunday, June 8

- Notebook Entries

Week 4
Monday, June 9 - Sunday, June 15

- Notebook Entries

Week 5
Monday, June 16 - Sunday, June 22

- Notebook Entries

Week 6
Monday, June 23 - Sunday, June 29

- Notebook Entries

Week 7
Monday, June 30 - Sunday, July 6

- Notebook Entries

Week 8
Monday, July 7 - Sunday, July 13

- Notebook Entries

Week 9
Monday, July 14 - Sunday, July 20

- Notebook Entries

Week 10
Monday, July 21 - Sunday, July 27

- Notebook Entries

Week 11
Monday, July 28 - Sunday, August 3

- Notebook Entries

Week 12
Monday, August 4 - Sunday, August 10

- Notebook Entries

Week 13
Monday, August 11 - Sunday, August 17

- Notebook Entries