Team:ETH Zurich/modeling/xor

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The terminator can be flipped once if either DBxb1 or ΦC31 is present. The state T<sub>off</sub> can be caused by two reasons. We further decompose it into two different states: T<sub>offBxb1</sub>(flipping due to presence of Bxb1) and T<sub>offΦC31</sub>(flipping due to presence of ΦC31).
The terminator can be flipped once if either DBxb1 or ΦC31 is present. The state T<sub>off</sub> can be caused by two reasons. We further decompose it into two different states: T<sub>offBxb1</sub>(flipping due to presence of Bxb1) and T<sub>offΦC31</sub>(flipping due to presence of ΦC31).
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[[File:ETH Zurich XOR Toffs.png|400px|center|Decomposition of the on output into two terminator states.]]
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[[File:ETH Zurich XOR Toffs.png|400px|center|thumb|Decomposition of the on output into two terminator states.]]
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Flipping by integrases is irreversible. The initial state, in which the terminator is on, is different from the state after two switches. From this last state, no further evolution of the system is possible. Therefore, we decompose the T<sub>on</sub> into two different states: T<sub>on,i</sub>(initial state of the system, no flipping) and T<sub>on,f</sub>(final state of the system after two flips).
Flipping by integrases is irreversible. The initial state, in which the terminator is on, is different from the state after two switches. From this last state, no further evolution of the system is possible. Therefore, we decompose the T<sub>on</sub> into two different states: T<sub>on,i</sub>(initial state of the system, no flipping) and T<sub>on,f</sub>(final state of the system after two flips).
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[[File:ETH Zurich XOR Tons.png|400px|center|Decomposition of the off output into two terminator states.]]
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[[File:ETH Zurich XOR Tons.png|400px|center|thumb|Decomposition of the off output into two terminator states.]]
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Revision as of 12:24, 14 October 2014

iGEM ETH Zurich 2014