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Team:ETH Zurich/modeling/parameters
From 2014.igem.org
(Difference between revisions)
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|k<sub>-DRLux</sub>||1 min<sup>-1</sup>||Dissociation rate of DRLux ||Weber | |k<sub>-DRLux</sub>||1 min<sup>-1</sup>||Dissociation rate of DRLux ||Weber | ||
| + | |- | ||
| + | |K<sub>dPLux</sub>||0.007652 min<sup>-1</sup>||Dissociation rate constant for DRLux-PLux ||Fitted | ||
|- | |- | ||
|d<sub>30C6HSL</sub>||0.004 min<sup>-1</sup>||Degradation rate of 30C6HSL||Estimated/Fitted | |d<sub>30C6HSL</sub>||0.004 min<sup>-1</sup>||Degradation rate of 30C6HSL||Estimated/Fitted | ||
Revision as of 03:36, 9 October 2014
Parameters
No model is complete without parameters. Our exhaustive list of parameters are summarised in the table below.
| Parameter | Value | Description | Reference | |||||
|---|---|---|---|---|---|---|---|---|
| αLuxR | 60 nMmin-1 | Production rate of LuxR | Estimated | |||||
| kRLux | 0.1 nM-1min-1 | Rate of formation of RLux from 30C6HSL and LuxR | Weber | |||||
| k-RLux | 10 min-1 | Dissociation rate of RLux | Weber | |||||
| kDRLux | 0.05 nM-1min-1 | Dimerization rate of RLux | Weber | |||||
| k-DRLux | 1 min-1 | Dissociation rate of DRLux | Weber | |||||
| KdPLux | 0.007652 min-1 | Dissociation rate constant for DRLux-PLux | Fitted | |||||
| d30C6HSL | 0.004 min-1 | Degradation rate of 30C6HSL | Estimated/Fitted | |||||
| dLuxR | 0.0174 min-1 | Degradation rate of LuxR | Weber | |||||
| dRLux | 0.0174 min-1 | Degradation rate of RLux | Weber | Total: 15 | Total: 29.55 |
