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Team:ETH Zurich/modeling/parameters
From 2014.igem.org
(Difference between revisions)
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|α<sub>LuxR</sub>||60 nMmin<sup>-1</sup>||Production rate of LuxR||Estimated | |α<sub>LuxR</sub>||60 nMmin<sup>-1</sup>||Production rate of LuxR||Estimated | ||
|- | |- | ||
| - | |k<sub>RLux</sub>||0.1 nM<sup>-1</sup>min<sup>-1</sup>|| | + | |k<sub>RLux</sub>||0.1 nM<sup>-1</sup>min<sup>-1</sup>|| Rate of formation of RLux from 30C6HSL and LuxR||Weber |
|- | |- | ||
|k<sub>-RLux</sub>||10 min<sup>-1</sup>||Dissociation rate of RLux ||Weber | |k<sub>-RLux</sub>||10 min<sup>-1</sup>||Dissociation rate of RLux ||Weber | ||
|- | |- | ||
| - | |k<sub>DRLux</sub>||0.05 nM<sup>-1</sup>min<sup>-1</sup>||Dimerization rate of | + | |k<sub>DRLux</sub>||0.05 nM<sup>-1</sup>min<sup>-1</sup>||Dimerization rate of RLux ||Weber |
|- | |- | ||
|k<sub>-DRLux</sub>||1 min<sup>-1</sup>||Dissociation rate of DRLux ||Weber | |k<sub>-DRLux</sub>||1 min<sup>-1</sup>||Dissociation rate of DRLux ||Weber | ||
Revision as of 03:18, 9 October 2014
Parameters
No model is complete without parameters. Our exhaustive list of parameters are summarised in the table below.
| Parameter | Value | Description | Reference | |||||
|---|---|---|---|---|---|---|---|---|
| αLuxR | 60 nMmin-1 | Production rate of LuxR | Estimated | |||||
| kRLux | 0.1 nM-1min-1 | Rate of formation of RLux from 30C6HSL and LuxR | Weber | |||||
| k-RLux | 10 min-1 | Dissociation rate of RLux | Weber | |||||
| kDRLux | 0.05 nM-1min-1 | Dimerization rate of RLux | Weber | |||||
| k-DRLux | 1 min-1 | Dissociation rate of DRLux | Weber | |||||
| k-LuxR | 10 min-1 | Dissociation rate of RLux | Weber | Total: 15 | Total: 29.55 |
