Team:ETH Zurich/modeling/int

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=== Modeling DNA-binding sites ===
=== Modeling DNA-binding sites ===
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Each dimer of integrases can specifically bind to a DNA binding site. As the flipping is irreversible, these DNA binding sites can be three possible states:  
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Each dimer of integrases can specifically bind to a DNA binding site. As the flipping is irreversible, these DNA binding sites can be in three possible states:  
* SI<sub>IntegraseName</sub>: inactive DNA binding site. No dimer is bound to this site, which has never been flipped.
* SI<sub>IntegraseName</sub>: inactive DNA binding site. No dimer is bound to this site, which has never been flipped.
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* SA<sub>IntegraseName</sub>: active DNA binding site. A dimer is to this site.
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* SA<sub>IntegraseName</sub>: active DNA binding site. A dimer is bound to this site.
* SF<sub>IntegraseName</sub>: flipped DNA binding site. This DNA binding site has been used by a flipping.
* SF<sub>IntegraseName</sub>: flipped DNA binding site. This DNA binding site has been used by a flipping.

Revision as of 05:28, 17 October 2014

iGEM ETH Zurich 2014