Team:EPF Lausanne

From 2014.igem.org

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<h2>Summary of our Project</h2>
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The 2014 EPFL iGEM team has been working on showing that biologically engineered organisms can detect and process signals in fast and efficient ways. With this in mind, our team worked on  bringing forward a novel idea: combining Protein Complementation techniques to Biosensors to achieve fast spatiotemporal analysis of bacterial response to stimuli.
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The goal of the 2014 EPFL iGEM team is to show that biologically engineered organisms can detect and process signals efficiently. We present a novel idea: combining protein complementation techniques with biosensors to achieve fast spatiotemporal analysis of bacterial response to stimuli.  
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As a proof of concept of this idea, we aimed to develop a BioPad: a biological TouchPad made of touch responsive bacteria in a microfluidic chip allowing the control of electronic devices. This was done by engineering the Cpx Pathway – a two component regulatory system responsive to periplasmic stress. </p>
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Our proof-of-concept is the BioPad: a biological touchpad for controlling electronic devices that is composed of touch-responsive bacteria in a microfluidic chip. We achieved this by engineering E coli’s Cpx pathway – a two-component regulatory system that is responsive to periplasmic stress.</p>
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<h2>Why a BioPad ?</h2>
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<h2>Why a BioPad?</h2>
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<p class="lead"> The biological concepts behind the BioPad project have applications both in basic and applied sciences. From a purely scientific perspective, the ideas introduced and implemented by our project are novel and promising for future applications. The BioPad is also an attractive concept that is tangible for the general public and will allow people to look at synthetic biology in a different way. Hence, the combination of novel biological concepts, a cool idea, and the community awareness that our project provides, makes the BioPad project perfect for iGEM !</p>
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<p class="lead">The biological concepts behind the BioPad project have applications in basic and applied science. The BioPad is also an interesting concept that could encourage public awareness of and engagement in synthetic biology. The combination of novel biological concepts and community awareness makes the BioPad an ideal project for iGEM.</p>
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<h2>The BioPad's applications</h2>
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<h2>The BioPad's Applications</h2>
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  <p class="lead">With respect to basic sciences, our system serves as a good proof that protein complementation techniques are ideal for the creation of fast responding biosensors – especially in the case of two component regulatory systems. The introduction of the split IFP1.4 (Infrared Fluorescent Protein) into the registry will allow future iGEM and research teams to take advantages of the reversibility and precision of this protein. As such, our project should be viewed as novel in its kind. We encourage future iGEM teams to implement the concepts developed by the EPF Lausanne team in other contexts to build faster and better biosensors !
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  <p class="lead">The BioPad system demonstrates that protein complementation techniques are suitable for biosensor applications – especially for two-component regulatory systems. The introduction of the split IFP1.4 into the registry will allow future iGEM research teams to take advantage of the reversibility and precision of this protein. Moreover, our work on the Cpx pathway will allow future iGEM teams to make novel uses of other members of the OmpR/PhoB subfamily, as well as other two-component regulatory systems.
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As for applied sciences, the potential uses of the BioPad include the delivery of a cheap, fast, efficient, and accurate antibiotic screening systems enabling an easy way to quantify how antibiotics affect the periplasm in gram negative bacteria; the BioPad project could also be the source of an "antibiotic complement" drug allowing
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The BioPad could potentially be used to deliver a cheap, efficient and accurate antibiotic screening system that allows researchers to easily quantify the effects of antibiotics on periplasm in gram-negative bacteria. The BioPad project could also provide a new approach to studying genes by allowing researchers to the examine the relationship between genes and their corresponding activating signals.</p>
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could also provide a new way to study genes by allowing the examine the relationship between genes and their corresponding activating signals</p>
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- TALK ABOUT THE REST
- TALK ABOUT THE REST

Revision as of 16:22, 6 October 2014

Our project in a nutshell


Summary of our Project

EPFL_interaction_IFP_cartoon

The goal of the 2014 EPFL iGEM team is to show that biologically engineered organisms can detect and process signals efficiently. We present a novel idea: combining protein complementation techniques with biosensors to achieve fast spatiotemporal analysis of bacterial response to stimuli.

Our proof-of-concept is the BioPad: a biological touchpad for controlling electronic devices that is composed of touch-responsive bacteria in a microfluidic chip. We achieved this by engineering E coli’s Cpx pathway – a two-component regulatory system that is responsive to periplasmic stress.

Why a BioPad?

Microfluidics

The biological concepts behind the BioPad project have applications in basic and applied science. The BioPad is also an interesting concept that could encourage public awareness of and engagement in synthetic biology. The combination of novel biological concepts and community awareness makes the BioPad an ideal project for iGEM.


The BioPad's Applications

The BioPad system demonstrates that protein complementation techniques are suitable for biosensor applications – especially for two-component regulatory systems. The introduction of the split IFP1.4 into the registry will allow future iGEM research teams to take advantage of the reversibility and precision of this protein. Moreover, our work on the Cpx pathway will allow future iGEM teams to make novel uses of other members of the OmpR/PhoB subfamily, as well as other two-component regulatory systems.

The BioPad could potentially be used to deliver a cheap, efficient and accurate antibiotic screening system that allows researchers to easily quantify the effects of antibiotics on periplasm in gram-negative bacteria. The BioPad project could also provide a new approach to studying genes by allowing researchers to the examine the relationship between genes and their corresponding activating signals.

- TALK ABOUT THE REST - LESS DETAILS - TALK ABOUT SPEED INCREASE - INTEGRATE MICROFLUIDICS + YEAST - PUT IN LINKS FOR OTHER PAGES

Stress responsive bacteria


touch bacteria

This is a description

Microfluidics

Our Biopad is implemented in a microfluidic chip. This tool allows all kinds of analytical experiments and is increasingly used in biological research. From fabrication to applications, find out more about this awesome device here!

Yeast

description

I.T

description

Human practice

description

MEET OUR TEAM

We are a group of 14 students from the faculties of Life, Biomechanical, and Computer Sciences, and are supervised by 2 EPFL professors, 1 Lecturer and 5 PhD students.

the team's students

Sponsors