Team:DTU-Denmark/Achievements/Calculator

From 2014.igem.org

(Difference between revisions)
Line 99: Line 99:
<table height="80px" width="360">
<table height="80px" width="360">
   <tr>
   <tr>
-
     <td width="60%" colspan="2">CFU count</td>
+
     <td width="63%" colspan="2">CFU count</td>
-
     <td width="17%" style="text-align:right; padding-top: 3px;">
+
     <td width="16%" style="text-align:right; padding-top: 3px;">
         <input name="CFU" type="number" step="any" min="0" style="width:90px"/>
         <input name="CFU" type="number" step="any" min="0" style="width:90px"/>
     </td>
     </td>
Line 114: Line 114:
<table width="360">
<table width="360">
   <tr>
   <tr>
-
     <td width="60%">OD600</td>
+
     <td width="63%">OD600</td>
-
     <td width="17%" style="text-align:right; padding-top: 3px;">
+
     <td width="16%" style="text-align:right; padding-top: 3px;">
         <input name="OD600" type="number" step="any" min="0" placeholder="Enter number" value="6.3" style="width:90px" />
         <input name="OD600" type="number" step="any" min="0" placeholder="Enter number" value="6.3" style="width:90px" />
     </td>
     </td>
Line 128: Line 128:
<table width="360">
<table width="360">
   <tr>
   <tr>
-
     <td width="60%" colspan="2">Degradation rate:</td>
+
     <td width="63%" colspan="2">Degradation rate:</td>
-
     <td width="17%" style="text-align:right; padding-top: 3px;">
+
     <td width="16%" style="text-align:right; padding-top: 3px;">
     <input name="degen" type="number" step="any" min="0" placeholder="rate" value="0.083" style="width:90px" />
     <input name="degen" type="number" step="any" min="0" placeholder="rate" value="0.083" style="width:90px" />
     </td>
     </td>
Line 148: Line 148:
<table width="360">
<table width="360">
   <tr>
   <tr>
-
     <td width="60%">Degradation half time:</td>
+
     <td width="63%">Degradation half time:</td>
-
     <td width="17%" style="text-align:right; padding-top: 3px;">
+
     <td width="16%" style="text-align:right; padding-top: 3px;">
         <input name="deghalf" type="number" step="any" min="0" placeholder="Half time" style="width:90px" />
         <input name="deghalf" type="number" step="any" min="0" placeholder="Half time" style="width:90px" />
</td>
</td>
Line 167: Line 167:
<table width="360">
<table width="360">
   <tr>
   <tr>
-
     <td width="60%" colspan="2">Growth rate:</td>
+
     <td width="63%" colspan="2">Growth rate:</td>
-
     <td width="17%" style="text-align:right; padding-top: 3px;">
+
     <td width="16%" style="text-align:right; padding-top: 3px;">
         <input name="growth" type="number" step="any" min="0" placeholder="growth" value="0.83" style="width:90px" />
         <input name="growth" type="number" step="any" min="0" placeholder="growth" value="0.83" style="width:90px" />
     <td width="21%" style="padding-top:4px">
     <td width="21%" style="padding-top:4px">
Line 186: Line 186:
<table width="360">
<table width="360">
   <tr>
   <tr>
-
     <td width="60%">Growth doubling time:</td>
+
     <td width="63%">Growth doubling time:</td>
-
     <td width="17%" style="text-align:right; padding-top: 3px;">
+
     <td width="16%" style="text-align:right; padding-top: 3px;">
         <input name="grodouble" type="number" step="any" min="0" placeholder="Doubling time" style="width:90px" />
         <input name="grodouble" type="number" step="any" min="0" placeholder="Doubling time" style="width:90px" />
     <td width="21%" style="padding-top:4px">
     <td width="21%" style="padding-top:4px">
Line 203: Line 203:
<table width="360">
<table width="360">
   <tr>
   <tr>
-
     <td width="60%">Fold-fraction:</td>
+
     <td width="63%">Fold-fraction:</td>
-
     <td width="17%" style="text-align:right; padding-top: 3px;">
+
     <td width="16%" style="text-align:right; padding-top: 3px;">
         <input name="foldfraction" type="number" step="any" min="0" placeholder="Enter number" value="50" style="width:90px" />
         <input name="foldfraction" type="number" step="any" min="0" placeholder="Enter number" value="50" style="width:90px" />
</td>
</td>
Line 210: Line 210:
   </tr>
   </tr>
   <tr>
   <tr>
-
     <td width="60%">Copy number:</td>
+
     <td width="63%">Copy number:</td>
-
     <td width="17%" style="text-align:right; padding-top: 3px;">
+
     <td width="16%" style="text-align:right; padding-top: 3px;">
         <input name="copynumber" type="number" step="any" min="0" placeholder="Enter number" value="300" style="width:90px" />
         <input name="copynumber" type="number" step="any" min="0" placeholder="Enter number" value="300" style="width:90px" />
     </td width="21%">
     </td width="21%">
Line 222: Line 222:
<table>
<table>
   <tr>
   <tr>
-
     <td width="60%">Promoter activity</td>
+
     <td width="63%">Promoter activity</td>
-
     <td width="17%" style="text-align:right"><output name="activity" type="number" step="0.1"></output></td>
+
     <td width="16%" style="text-align:right"><output name="activity" type="number" step="0.1"></output></td>
     <td width="21%">PoPS</td>
     <td width="21%">PoPS</td>
   </tr>
   </tr>

Revision as of 19:44, 17 October 2014

Technical University of Denmark

Fluorescence:
Standard curve, intercept:
Standard curve, slope:
Spinach concentration: µM
Input concentration directly
CFU count CFU/L
Use OD measurement
OD600
Degradation rate:
Use degradation half time
Degradation half time:
Growth rate:
Use growth doubling time
Growth doubling time:
Fold-fraction: %
Copy number:
Promoter activity PoPS








Technical University of Denmark
Department of Systems Biology
Søltofts Plads 221
2800 Kgs. Lyngby
Denmark
+45 45 25 25 25
dtuigem14@gmail.com .

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