"

From 2014.igem.org

/*

Highcharts JS v4.0.4 (2014-09-02)

(c) 2009-2014 Torstein Honsi

License: www.highcharts.com/license

• /

(function(l,C){function K(a,b,c){this.init.call(this,a,b,c)}var P=l.arrayMin,Q=l.arrayMax,s=l.each,F=l.extend,q=l.merge,R=l.map,o=l.pick,x=l.pInt,p=l.getOptions().plotOptions,g=l.seriesTypes,v=l.extendClass,L=l.splat,r=l.wrap,M=l.Axis,y=l.Tick,H=l.Point,S=l.Pointer,T=l.CenteredSeriesMixin,z=l.TrackerMixin,t=l.Series,w=Math,D=w.round,A=w.floor,N=w.max,U=l.Color,u=function(){};F(K.prototype,{init:function(a,b,c){var d=this,e=d.defaultOptions;d.chart=b;if(b.angular)e.background={};d.options=a=q(e,a); (a=a.background)&&s([].concat(L(a)).reverse(),function(a){var b=a.backgroundColor,a=q(d.defaultBackgroundOptions,a);if(b)a.backgroundColor=b;a.color=a.backgroundColor;c.options.plotBands.unshift(a)})},defaultOptions:{center:["50%","50%"],size:"85%",startAngle:0},defaultBackgroundOptions:{shape:"circle",borderWidth:1,borderColor:"silver",backgroundColor:{linearGradient:{x1:0,y1:0,x2:0,y2:1},stops:[[0,"#FFF"],[1,"#DDD"]]},from:-Number.MAX_VALUE,innerRadius:0,to:Number.MAX_VALUE,outerRadius:"105%"}}); 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Upper quartile: {point.q3}
Median: {point.median}
Lower quartile: {point.q1}
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'},whiskerLength:"50%",whiskerWidth:2});g.boxplot=v(g.column,{type:"boxplot",pointArrayMap:["low","q1","median","q3","high"],toYData:function(a){return[a.low,a.q1,a.median,a.q3,a.high]},pointValKey:"high",pointAttrToOptions:{fill:"fillColor",stroke:"color","stroke-width":"lineWidth"}, drawDataLabels:u,translate:function(){var a=this.yAxis,b=this.pointArrayMap;g.column.prototype.translate.apply(this);s(this.points,function(c){s(b,function(b){c[b]!==null&&(c[b+"Plot"]=a.translate(c[b],0,1,0,1))})})},drawPoints:function(){var a=this,b=a.points,c=a.options,d=a.chart.renderer,e,f,h,j,k,m,i,n,g,l,p,I,r,q,J,u,v,t,w,x,z,y,E=a.doQuartiles!==!1,B=parseInt(a.options.whiskerLength,10)/100;s(b,function(b){g=b.graphic;z=b.shapeArgs;p={};q={};u={};y=b.color||a.color;if(b.plotY!==C)if(e=b.pointAttr[b.selected? "selected":""],v=z.width,t=A(z.x),w=t+v,x=D(v/2),f=A(E?b.q1Plot:b.lowPlot),h=A(E?b.q3Plot:b.lowPlot),j=A(b.highPlot),k=A(b.lowPlot),p.stroke=b.stemColor||c.stemColor||y,p["stroke-width"]=o(b.stemWidth,c.stemWidth,c.lineWidth),p.dashstyle=b.stemDashStyle||c.stemDashStyle,q.stroke=b.whiskerColor||c.whiskerColor||y,q["stroke-width"]=o(b.whiskerWidth,c.whiskerWidth,c.lineWidth),u.stroke=b.medianColor||c.medianColor||y,u["stroke-width"]=o(b.medianWidth,c.medianWidth,c.lineWidth),u["stroke-linecap"]="round", i=p["stroke-width"]%2/2,n=t+x+i,l=["M",n,h,"L",n,j,"M",n,f,"L",n,k],E&&(i=e["stroke-width"]%2/2,n=A(n)+i,f=A(f)+i,h=A(h)+i,t+=i,w+=i,I=["M",t,h,"L",t,f,"L",w,f,"L",w,h,"L",t,h,"z"]),B&&(i=q["stroke-width"]%2/2,j+=i,k+=i,r=["M",n-x*B,j,"L",n+x*B,j,"M",n-x*B,k,"L",n+x*B,k]),i=u["stroke-width"]%2/2,m=D(b.medianPlot)+i,J=["M",t,m,"L",w,m],g)b.stem.animate({d:l}),B&&b.whiskers.animate({d:r}),E&&b.box.animate({d:I}),b.medianShape.animate({d:J});else{b.graphic=g=d.g().add(a.group);b.stem=d.path(l).attr(p).add(g); if(B)b.whiskers=d.path(r).attr(q).add(g);if(E)b.box=d.path(I).attr(e).add(g);b.medianShape=d.path(J).attr(u).add(g)}})}});p.errorbar=q(p.boxplot,{color:"#000000",grouping:!1,linkedTo:":previous",tooltip:{pointFormat:'● {series.name}: {point.low} - {point.high}
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this.yAxis,b,c,d,e,f,h,j,k,m,i;b=this.options.threshold;g.column.prototype.translate.apply(this);k=m=b;d=this.points;for(c=0,b=d.length;c<b;c++){e=d[c];f=e.shapeArgs;h=this.getStack(c);i=h.points[this.index+","+c];if(isNaN(e.y))e.y=this.yData[c];j=N(k,k+e.y)+i[0];f.y=a.translate(j,0,1);e.isSum?(f.y=a.translate(i[1],0,1),f.height=a.translate(i[0],0,1)-f.y):e.isIntermediateSum?(f.y=a.translate(i[1],0,1),f.height=a.translate(m,0,1)-f.y,m=i[1]):k+=h.total;f.height<0&&(f.y+=f.height,f.height*=-1);e.plotY= f.y=D(f.y)-this.borderWidth%2/2;f.height=N(D(f.height),0.001);e.yBottom=f.y+f.height;f=e.plotY+(e.negative?f.height:0);this.chart.inverted?e.tooltipPos[0]=a.len-f:e.tooltipPos[1]=f}},processData:function(a){var b=this.yData,c=this.points,d,e=b.length,f,h,j,k,m,i;h=f=j=k=this.options.threshold||0;for(i=0;i<e;i++)m=b[i],d=c&&c[i]?c[i]:{},m==="sum"||d.isSum?b[i]=h:m==="intermediateSum"||d.isIntermediateSum?b[i]=f:(h+=m,f+=m),j=Math.min(h,j),k=Math.max(h,k);t.prototype.processData.call(this,a);this.dataMin= j;this.dataMax=k},toYData:function(a){if(a.isSum)return a.x===0?null:"sum";else if(a.isIntermediateSum)return a.x===0?null:"intermediateSum";return a.y},getAttribs:function(){g.column.prototype.getAttribs.apply(this,arguments);var a=this.options,b=a.states,c=a.upColor||this.color,a=l.Color(c).brighten(0.1).get(),d=q(this.pointAttr),e=this.upColorProp;d[""][e]=c;d.hover[e]=b.hover.upColor||a;d.select[e]=b.select.upColor||c;s(this.points,function(a){if(a.y>0&&!a.color)a.pointAttr=d,a.color=c})},getGraphPath:function(){var a= this.data,b=a.length,c=D(this.options.lineWidth+this.borderWidth)%2/2,d=[],e,f,h;for(h=1;h<b;h++)f=a[h].shapeArgs,e=a[h-1].shapeArgs,f=["M",e.x+e.width,e.y+c,"L",f.x,e.y+c],a[h-1].y<0&&(f[2]+=e.height,f[5]+=e.height),d=d.concat(f);return d},getExtremes:u,getStack:function(a){var b=this.yAxis.stacks,c=this.stackKey;this.processedYData[a]<this.options.threshold&&(c="-"+c);return b[c][a]},drawGraph:t.prototype.drawGraph});p.bubble=q(p.scatter,{dataLabels:{formatter:function(){return this.point.z},inside:!0, style:{color:"white",textShadow:"0px 0px 3px black"},verticalAlign:"middle"},marker:{lineColor:null,lineWidth:1},minSize:8,maxSize:"20%",states:{hover:{halo:{size:5}}},tooltip:{pointFormat:"({point.x}, {point.y}), Size: {point.z}"},turboThreshold:0,zThreshold:0});z=v(H,{haloPath:function(){return H.prototype.haloPath.call(this,this.shapeArgs.r+this.series.options.states.hover.halo.size)}});g.bubble=v(g.scatter,{type:"bubble",pointClass:z,pointArrayMap:["y","z"],parallelArrays:["x","y","z"],trackerGroups:["group", "dataLabelsGroup"],bubblePadding:!0,pointAttrToOptions:{stroke:"lineColor","stroke-width":"lineWidth",fill:"fillColor"},applyOpacity:function(a){var b=this.options.marker,c=o(b.fillOpacity,0.5),a=a||b.fillColor||this.color;c!==1&&(a=U(a).setOpacity(c).get("rgba"));return a},convertAttribs:function(){var a=t.prototype.convertAttribs.apply(this,arguments);a.fill=this.applyOpacity(a.fill);return a},getRadii:function(a,b,c,d){var e,f,h,j=this.zData,k=[],m=this.options.sizeBy!=="width";for(f=0,e=j.length;f< e;f++)h=b-a,h=h>0?(j[f]-a)/(b-a):0.5,m&&h>=0&&(h=Math.sqrt(h)),k.push(w.ceil(c+h*(d-c))/2);this.radii=k},animate:function(a){var b=this.options.animation;if(!a)s(this.points,function(a){var d=a.graphic,a=a.shapeArgs;d&&a&&(d.attr("r",1),d.animate({r:a.r},b))}),this.animate=null},translate:function(){var a,b=this.data,c,d,e=this.radii;g.scatter.prototype.translate.call(this);for(a=b.length;a--;)c=b[a],d=e?e[a]:0,c.negative=c.z<(this.options.zThreshold||0),d>=this.minPxSize/2?(c.shapeType="circle", c.shapeArgs={x:c.plotX,y:c.plotY,r:d},c.dlBox={x:c.plotX-d,y:c.plotY-d,width:2*d,height:2*d}):c.shapeArgs=c.plotY=c.dlBox=C},drawLegendSymbol:function(a,b){var c=x(a.itemStyle.fontSize)/2;b.legendSymbol=this.chart.renderer.circle(c,a.baseline-c,c).attr({zIndex:3}).add(b.legendGroup);b.legendSymbol.isMarker=!0},drawPoints:g.column.prototype.drawPoints,alignDataLabel:g.column.prototype.alignDataLabel});M.prototype.beforePadding=function(){var a=this,b=this.len,c=this.chart,d=0,e=b,f=this.isXAxis,h= f?"xData":"yData",j=this.min,k={},m=w.min(c.plotWidth,c.plotHeight),i=Number.MAX_VALUE,n=-Number.MAX_VALUE,g=this.max-j,l=b/g,p=[];this.tickPositions&&(s(this.series,function(b){var h=b.options;if(b.bubblePadding&&(b.visible||!c.options.chart.ignoreHiddenSeries))if(a.allowZoomOutside=!0,p.push(b),f)s(["minSize","maxSize"],function(a){var b=h[a],f=/%$/.test(b),b=x(b);k[a]=f?m*b/100:b}),b.minPxSize=k.minSize,b=b.zData,b.length&&(i=o(h.zMin,w.min(i,w.max(P(b),h.displayNegative===!1?h.zThreshold:-Number.MAX_VALUE))), n=o(h.zMax,w.max(n,Q(b))))}),s(p,function(a){var b=a[h],c=b.length,m;f&&a.getRadii(i,n,k.minSize,k.maxSize);if(g>0)for(;c--;)typeof b[c]==="number"&&(m=a.radii[c],d=Math.min((b[c]-j)*l-m,d),e=Math.max((b[c]-j)*l+m,e))}),p.length&&g>0&&o(this.options.min,this.userMin)===C&&o(this.options.max,this.userMax)===C&&(e-=b,l*=(b+d-e)/b,this.min+=d/l,this.max+=e/l))};(function(){function a(a,b,c){a.call(this,b,c);if(this.chart.polar)this.closeSegment=function(a){var b=this.xAxis.center;a.push("L",b[0],b[1])}, this.closedStacks=!0}function b(a,b){var c=this.chart,d=this.options.animation,e=this.group,i=this.markerGroup,n=this.xAxis.center,g=c.plotLeft,l=c.plotTop;if(c.polar){if(c.renderer.isSVG)d===!0&&(d={}),b?(c={translateX:n[0]+g,translateY:n[1]+l,scaleX:0.001,scaleY:0.001},e.attr(c),i&&i.attr(c)):(c={translateX:g,translateY:l,scaleX:1,scaleY:1},e.animate(c,d),i&&i.animate(c,d),this.animate=null)}else a.call(this,b)}var c=t.prototype,d=S.prototype,e;c.toXY=function(a){var b,c=this.chart,d=a.plotX;b= a.plotY;a.rectPlotX=d;a.rectPlotY=b;d=(d/Math.PI*180+this.xAxis.pane.options.startAngle)%360;d<0&&(d+=360);a.clientX=d;b=this.xAxis.postTranslate(a.plotX,this.yAxis.len-b);a.plotX=a.polarPlotX=b.x-c.plotLeft;a.plotY=a.polarPlotY=b.y-c.plotTop};c.orderTooltipPoints=function(a){if(this.chart.polar&&(a.sort(function(a,b){return a.clientX-b.clientX}),a[0]))a[0].wrappedClientX=a[0].clientX+360,a.push(a[0])};g.area&&r(g.area.prototype,"init",a);g.areaspline&&r(g.areaspline.prototype,"init",a);g.spline&& r(g.spline.prototype,"getPointSpline",function(a,b,c,d){var e,i,n,g,l,p,o;if(this.chart.polar){e=c.plotX;i=c.plotY;a=b[d-1];n=b[d+1];this.connectEnds&&(a||(a=b[b.length-2]),n||(n=b[1]));if(a&&n)g=a.plotX,l=a.plotY,b=n.plotX,p=n.plotY,g=(1.5*e+g)/2.5,l=(1.5*i+l)/2.5,n=(1.5*e+b)/2.5,o=(1.5*i+p)/2.5,b=Math.sqrt(Math.pow(g-e,2)+Math.pow(l-i,2)),p=Math.sqrt(Math.pow(n-e,2)+Math.pow(o-i,2)),g=Math.atan2(l-i,g-e),l=Math.atan2(o-i,n-e),o=Math.PI/2+(g+l)/2,Math.abs(g-o)>Math.PI/2&&(o-=Math.PI),g=e+Math.cos(o)* b,l=i+Math.sin(o)*b,n=e+Math.cos(Math.PI+o)*p,o=i+Math.sin(Math.PI+o)*p,c.rightContX=n,c.rightContY=o;d?(c=["C",a.rightContX||a.plotX,a.rightContY||a.plotY,g||e,l||i,e,i],a.rightContX=a.rightContY=null):c=["M",e,i]}else c=a.call(this,b,c,d);return c});r(c,"translate",function(a){a.call(this);if(this.chart.polar&&!this.preventPostTranslate)for(var a=this.points,b=a.length;b--;)this.toXY(a[b])});r(c,"getSegmentPath",function(a,b){var c=this.points;if(this.chart.polar&&this.options.connectEnds!==!1&& b[b.length-1]===c[c.length-1]&&c[0].y!==null)this.connectEnds=!0,b=[].concat(b,[c[0]]);return a.call(this,b)});r(c,"animate",b);r(c,"setTooltipPoints",function(a,b){this.chart.polar&&F(this.xAxis,{tooltipLen:360});return a.call(this,b)});if(g.column)e=g.column.prototype,r(e,"animate",b),r(e,"translate",function(a){var b=this.xAxis,c=this.yAxis.len,d=b.center,e=b.startAngleRad,i=this.chart.renderer,g,l;this.preventPostTranslate=!0;a.call(this);if(b.isRadial){b=this.points;for(l=b.length;l--;)g=b[l], a=g.barX+e,g.shapeType="path",g.shapeArgs={d:i.symbols.arc(d[0],d[1],c-g.plotY,null,{start:a,end:a+g.pointWidth,innerR:c-o(g.yBottom,c)})},this.toXY(g),g.tooltipPos=[g.plotX,g.plotY],g.ttBelow=g.plotY>d[1]}}),r(e,"alignDataLabel",function(a,b,d,e,g,i){if(this.chart.polar){a=b.rectPlotX/Math.PI*180;if(e.align===null)e.align=a>20&&a<160?"left":a>200&&a<340?"right":"center";if(e.verticalAlign===null)e.verticalAlign=a<45||a>315?"bottom":a>135&&a<225?"top":"middle";c.alignDataLabel.call(this,b,d,e,g,i)}else a.call(this, b,d,e,g,i)});r(d,"getIndex",function(a,b){var c,d=this.chart,e;d.polar?(e=d.xAxis[0].center,c=b.chartX-e[0]-d.plotLeft,d=b.chartY-e[1]-d.plotTop,c=180-Math.round(Math.atan2(c,d)/Math.PI*180)):c=a.call(this,b);return c});r(d,"getCoordinates",function(a,b){var c=this.chart,d={xAxis:[],yAxis:[]};c.polar?s(c.axes,function(a){var e=a.isXAxis,f=a.center,g=b.chartX-f[0]-c.plotLeft,f=b.chartY-f[1]-c.plotTop;d[e?"xAxis":"yAxis"].push({axis:a,value:a.translate(e?Math.PI-Math.atan2(g,f):Math.sqrt(Math.pow(g, 2)+Math.pow(f,2)),!0)})}):d=a.call(this,b);return d})})()})(Highcharts);